Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021710.1 Corchorus olitorius cultivar O-4 contig21743, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16685

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
452--495
2
22.5
2
95
4
81
50
0
0
50
1.00
3204--3240
19
2.0
19
94
5
67
62
0
0
37
0.96
14511--14588
39
2.0
39
97
0
147
50
7
30
11
1.67
15516--15542
2
13.5
2
100
0
54
51
0
0
48
1.00
15944--16034
30
3.0
30
90
1
128
26
17
4
51
1.64
16104--16278
85
2.1
85
89
4
264
36
9
4
50
1.53
16445--16601
82
1.9
84
88
5
239
36
8
3
51
1.49

Tables:   1

The End!