Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021717.1 Corchorus olitorius cultivar O-4 contig21750, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10234

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
207--241
18
1.9
18
88
0
52
40
28
0
31
1.57
714--761
19
2.6
19
80
12
55
81
0
12
6
0.87
899--973
31
2.6
29
82
6
89
44
9
14
32
1.77
5755--5806
27
1.9
27
84
7
70
61
11
5
21
1.50
7646--7679
8
4.2
8
88
0
50
38
0
11
50
1.39
7744--7777
16
2.1
17
94
5
61
70
0
11
17
1.16
7989--8130
22
6.2
22
72
12
115
22
21
14
42
1.88
7964--8212
94
2.7
93
93
1
444
24
21
14
40
1.90
8162--8212
22
2.4
22
87
6
70
21
21
15
41
1.90

Tables:   1

The End!