Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021719.1 Corchorus olitorius cultivar O-4 contig21752, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8253

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4214--4249
2
18.0
2
100
0
72
50
0
0
50
1.00
4637--4680
14
3.2
14
90
3
63
47
11
9
31
1.71
6323--7064
36
20.9
35
75
6
469
17
18
25
39
1.92
6327--7064
71
10.4
70
73
7
468
17
18
25
39
1.92
6398--6853
142
3.2
142
81
3
544
16
19
24
39
1.92
6477--6948
213
2.2
214
88
1
678
16
18
26
39
1.91
6323--6853
107
5.0
105
76
7
464
16
19
23
39
1.92
6468--7064
107
5.6
108
75
6
448
16
17
26
39
1.91
6726--7055
179
1.8
179
79
2
385
16
16
27
38
1.91

Tables:   1

The End!