Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01002172.1 Corchorus olitorius cultivar O-4 contig02172, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5986

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
548--681
67
2.0
67
98
0
259
39
13
7
39
1.73
2049--2079
10
3.1
10
90
0
53
54
9
35
0
1.33
2686--2730
21
2.2
21
88
7
67
24
31
2
42
1.67
2693--2739
21
2.2
21
84
3
58
34
27
2
36
1.69
5099--5139
20
2.1
20
95
4
75
4
36
0
58
1.20
5278--5321
20
2.2
20
91
0
70
29
11
13
45
1.79

Tables:   1

The End!