Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021724.1 Corchorus olitorius cultivar O-4 contig21757, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21947

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91--121
2
15.5
2
93
0
53
48
0
0
51
1.00
346--394
22
2.2
22
96
0
89
46
8
12
32
1.71
586--626
17
2.4
17
87
0
55
43
2
2
51
1.28
5719--5743
10
2.5
10
100
0
50
80
8
12
0
0.92
5959--6164
111
1.9
111
87
2
306
39
10
10
39
1.75
7320--7358
13
3.1
12
85
7
51
61
15
17
5
1.51
7855--7901
24
2.0
24
87
8
69
17
14
6
61
1.53
8043--8104
31
2.1
31
87
6
92
30
12
16
40
1.86
14280--14965
76
9.1
76
82
3
812
16
25
36
22
1.94
14281--14965
226
3.0
227
82
3
817
16
25
36
22
1.94
14280--14965
302
2.3
302
90
1
1079
16
25
36
22
1.94
21125--21166
15
2.7
15
92
3
66
64
14
9
11
1.50

Tables:   1

The End!