Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021727.1 Corchorus olitorius cultivar O-4 contig21760, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10613

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1863--1956
31
3.1
29
82
10
109
43
11
7
37
1.69
1863--1956
28
3.1
29
81
17
102
43
11
7
37
1.69
2078--2150
30
2.4
30
90
4
112
32
35
13
17
1.89
3111--3136
11
2.4
11
100
0
52
69
7
15
7
1.35

Tables:   1

The End!