Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021728.1 Corchorus olitorius cultivar O-4 contig21761, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17044

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7206--7230
2
12.5
2
100
0
50
52
0
0
48
1.00
7153--7250
50
1.9
49
91
6
160
46
6
13
33
1.67
7334--7433
51
2.0
51
95
0
182
37
3
13
47
1.58
9549--9590
15
2.7
15
92
3
66
64
14
9
11
1.50
10970--11029
29
2.0
31
83
6
79
40
16
8
35
1.79
10999--11029
11
2.7
12
90
10
55
38
19
6
35
1.77
10988--11028
11
3.9
11
82
17
52
39
19
7
34
1.80
12889--12943
21
2.6
21
88
0
74
14
20
47
18
1.83
16205--16296
29
3.2
29
85
3
123
36
18
9
34
1.84
16687--16728
15
2.7
15
92
3
66
64
14
9
11
1.50

Tables:   1

The End!