Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021732.1 Corchorus olitorius cultivar O-4 contig21765, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24036

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8596--8621
13
2.0
13
100
0
52
15
0
30
53
1.42
12081--12122
21
2.0
22
90
9
70
50
4
9
35
1.56
12086--12147
21
3.0
22
86
6
76
40
11
9
38
1.74
12081--12152
21
3.2
24
80
18
68
38
9
8
43
1.68
12398--12446
22
2.3
21
80
13
55
28
8
4
59
1.45
12392--12436
22
2.0
22
87
8
65
33
8
4
53
1.52
15610--15684
28
2.7
28
83
8
91
32
17
12
38
1.86
17258--17298
2
20.5
2
100
0
82
48
0
0
51
1.00
18832--18873
18
2.3
18
100
0
84
33
11
28
26
1.92

Tables:   1

The End!