Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021744.1 Corchorus olitorius cultivar O-4 contig21777, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6994

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
558--599
15
2.7
15
88
3
57
64
14
11
9
1.50
1353--1378
11
2.4
11
100
0
52
69
7
15
7
1.35
2480--2525
16
2.9
16
75
12
51
50
8
8
32
1.64
2819--2843
12
2.1
12
100
0
50
48
16
8
28
1.74
4854--5014
64
2.5
64
84
6
195
36
14
20
28
1.93
5223--5305
41
2.0
41
92
0
139
33
13
21
31
1.92
5309--5570
64
4.0
65
75
11
241
35
14
22
27
1.93
5796--6156
51
7.1
51
92
0
580
36
11
27
24
1.90
6385--6456
26
2.7
27
80
4
74
20
13
25
40
1.90

Tables:   1

The End!