Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01002175.1 Corchorus olitorius cultivar O-4 contig02175, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1538

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
440--531
2
42.5
2
81
18
105
46
8
0
44
1.34
437--531
7
14.1
7
89
10
121
46
9
0
44
1.36
431--531
47
2.1
47
89
7
152
46
8
0
43
1.41
880--976
7
14.1
7
89
10
132
45
11
0
43
1.40
1288--1446
82
1.9
82
97
0
300
39
13
7
39
1.73

Tables:   1

The End!