Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021750.1 Corchorus olitorius cultivar O-4 contig21783, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24873

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5473--5512
17
2.4
17
87
8
55
22
20
20
37
1.94
9113--9151
16
2.4
16
83
8
53
33
41
15
10
1.81
9376--9415
2
21.5
2
80
14
50
50
0
2
47
1.14
12387--12527
33
4.3
31
80
9
120
43
22
7
26
1.78
13928--13966
19
2.0
19
85
14
53
12
5
7
74
1.20
14074--14120
26
1.9
23
87
12
67
40
4
27
27
1.75
14909--14945
15
2.5
15
90
0
65
67
8
8
16
1.40
17286--17313
12
2.3
12
100
0
56
50
32
17
0
1.47
17535--17576
21
2.0
22
86
13
61
76
4
11
7
1.15
19069--19112
15
3.0
15
86
3
54
34
0
0
65
0.93
20214--20242
14
2.1
14
93
6
51
72
0
0
27
0.85
21378--21521
49
3.0
47
82
8
159
50
6
15
27
1.67
22768--22796
9
3.3
9
95
4
51
37
17
0
44
1.49
23316--23341
12
2.2
12
100
0
52
46
15
0
38
1.46
23663--23734
31
2.3
31
79
9
85
27
4
8
59
1.45
24164--24263
45
2.3
44
86
8
141
43
19
6
32
1.75
24510--24873
175
2.1
177
89
3
556
50
9
13
26
1.71

Tables:   1

The End!