Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021751.1 Corchorus olitorius cultivar O-4 contig21784, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16199

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6972--7001
2
15.0
2
100
0
60
50
0
0
50
1.00
8269--8295
2
13.5
2
100
0
54
51
0
0
48
1.00
9279--9644
84
4.3
84
92
1
572
42
27
9
21
1.83
9279--9644
43
8.7
43
87
4
521
42
27
9
21
1.83
16018--16117
29
3.3
30
80
4
130
32
22
9
37
1.85

Tables:   1

The End!