Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021756.1 Corchorus olitorius cultivar O-4 contig21789, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27632

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4900--4941
22
2.0
22
90
4
68
30
11
9
47
1.72
6206--6285
39
2.1
39
100
0
160
17
17
25
40
1.91
8759--8889
65
2.0
65
83
5
167
35
19
12
31
1.90
11196--11255
30
2.0
30
93
0
102
41
10
25
23
1.85
18153--18233
39
2.0
40
92
2
137
50
8
3
37
1.51
18224--18269
24
2.0
23
95
4
83
30
6
8
54
1.56
18339--18944
204
3.0
203
97
0
1135
35
11
8
44
1.70
27136--27193
6
9.7
6
88
0
62
22
34
29
13
1.93

Tables:   1

The End!