Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021758.1 Corchorus olitorius cultivar O-4 contig21791, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3039

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
162--272
31
3.6
31
90
4
165
41
16
17
25
1.89
722--777
22
2.5
22
79
0
58
41
14
8
35
1.77
1060--1166
22
4.9
22
76
14
96
38
17
10
33
1.84
1140--1192
26
2.0
27
82
10
65
39
9
9
41
1.70
1235--1423
22
8.5
22
75
5
148
38
14
10
37
1.80
1324--1423
43
2.3
44
82
1
130
40
15
8
37
1.76
1324--1435
22
5.1
22
78
3
100
41
16
7
34
1.76
1689--1715
12
2.2
12
100
0
54
48
0
0
51
1.00
1913--1992
29
2.7
29
88
3
106
28
17
13
40
1.88
2126--2185
31
1.9
31
93
0
102
45
16
16
21
1.86
2136--2200
31
2.1
31
91
0
103
41
15
12
30
1.84

Tables:   1

The End!