Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021760.1 Corchorus olitorius cultivar O-4 contig21793, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15789

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3072--3114
22
1.9
23
95
4
79
37
13
23
25
1.92
4183--4237
26
2.1
26
89
0
83
38
5
27
29
1.79
4775--4887
53
2.2
52
87
6
160
24
18
7
49
1.72
6663--6697
18
1.9
18
100
0
70
37
11
17
34
1.85
6702--6732
10
3.1
10
95
0
53
38
19
12
29
1.89
7150--7186
10
3.7
10
100
0
74
27
10
18
43
1.83
11879--11925
6
7.8
6
92
0
76
19
34
31
14
1.92
12567--12637
36
2.0
36
94
0
124
28
14
15
42
1.86
12850--12888
3
13.0
3
100
0
78
33
0
33
33
1.58
12898--12927
4
7.5
4
100
0
60
76
0
0
23
0.78

Tables:   1

The End!