Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021764.1 Corchorus olitorius cultivar O-4 contig21797, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25049

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3900--3942
18
2.4
17
81
11
50
18
18
16
46
1.84
6092--6120
10
2.7
11
89
10
51
20
6
17
55
1.65
12575--12644
36
2.0
34
88
5
104
14
10
20
55
1.67
12585--12678
18
5.1
19
73
19
83
14
8
18
58
1.61
12786--12829
18
2.3
20
84
7
65
31
4
15
47
1.66
15291--15330
20
2.1
19
86
9
55
60
7
22
10
1.54
17918--17954
18
2.0
19
89
5
58
64
10
10
13
1.49
17946--17982
14
2.6
14
95
0
65
70
0
27
2
1.01
19334--19392
30
1.9
30
82
3
73
8
15
1
74
1.13

Tables:   1

The End!