Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021766.1 Corchorus olitorius cultivar O-4 contig21799, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5551

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1729--1896
27
6.3
27
79
2
160
36
22
19
20
1.95
1728--1896
53
3.2
53
75
4
160
37
22
19
20
1.95
1729--1896
80
2.1
80
95
0
300
36
22
19
20
1.95
2173--2332
50
3.2
50
92
0
266
31
25
10
32
1.90
2391--2676
50
5.7
50
94
0
484
27
13
28
30
1.94
2756--2959
91
2.2
91
88
6
290
40
12
17
29
1.86
3326--3421
50
1.9
50
86
0
138
35
15
17
31
1.92

Tables:   1

The End!