Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021767.1 Corchorus olitorius cultivar O-4 contig21800, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16590

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2013--2071
24
2.5
24
82
0
82
20
11
28
38
1.88
2272--2352
24
3.4
24
65
21
71
30
17
24
27
1.97
2922--2956
2
17.5
2
100
0
70
51
0
0
48
1.00
3302--3326
2
12.5
2
100
0
50
48
0
0
52
1.00
3888--3918
7
4.4
7
100
0
62
41
0
58
0
0.98
4006--4109
51
2.0
51
96
0
190
36
7
41
14
1.75
5968--6005
9
4.2
9
100
0
76
34
52
0
13
1.40
15797--15837
16
2.8
14
82
13
55
51
7
14
26
1.69

Tables:   1

The End!