Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021770.1 Corchorus olitorius cultivar O-4 contig21803, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25873

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
182--214
14
2.4
14
90
5
50
6
9
33
51
1.58
1311--1526
108
2.0
107
98
0
414
23
25
24
27
2.00
1888--1956
34
2.0
34
100
0
138
30
23
8
37
1.85
8428--8545
59
2.0
59
89
0
182
19
11
19
50
1.77
11598--11629
11
2.9
11
90
0
55
78
18
3
0
0.89
24503--24601
33
3.0
33
96
0
180
23
14
40
22
1.90

Tables:   1

The End!