Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021772.1 Corchorus olitorius cultivar O-4 contig21805, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46411

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10084--10126
20
2.2
20
87
8
61
44
2
51
2
1.27
11400--11433
15
2.2
16
89
5
52
11
64
2
20
1.39
17248--17286
19
2.0
20
95
5
71
30
20
20
28
1.98
19057--19097
5
9.0
5
84
15
54
19
0
0
80
0.71
23357--23381
12
2.1
12
100
0
50
44
8
16
32
1.76
23729--23836
31
3.5
31
72
14
107
34
19
19
26
1.96
23876--24038
60
2.7
60
88
1
229
28
19
15
36
1.92
23938--24042
31
3.4
32
72
15
96
26
21
17
34
1.95
30800--30878
7
11.1
7
77
17
65
44
0
2
53
1.14
30796--30830
18
1.9
18
88
11
54
40
0
0
60
0.97
38423--38583
79
2.0
79
89
7
247
32
14
12
40
1.84

Tables:   1

The End!