Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021780.1 Corchorus olitorius cultivar O-4 contig21813, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26437

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3027--3078
25
2.1
25
100
0
104
48
7
26
17
1.74
11995--12022
7
4.0
7
100
0
56
42
0
57
0
0.99
14380--14441
31
2.0
31
93
0
106
29
22
6
41
1.78
14478--14646
92
1.8
93
93
1
295
30
13
3
52
1.57
14492--14678
92
2.0
92
83
2
230
34
12
3
49
1.59
16473--16604
24
5.7
24
68
13
78
46
0
2
50
1.19
16459--16639
92
2.0
92
93
4
314
44
1
2
51
1.23
17718--17746
14
2.1
14
100
0
58
55
13
6
24
1.63
17839--17925
33
2.7
33
89
5
124
57
6
5
29
1.48
19293--19317
13
1.9
13
100
0
50
32
8
20
40
1.81
22227--22414
60
3.0
60
91
7
277
27
19
22
30
1.98
23996--24090
46
2.1
46
100
0
190
50
18
9
21
1.75

Tables:   1

The End!