Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021783.1 Corchorus olitorius cultivar O-4 contig21816, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14731

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1115--1149
11
3.2
11
83
0
52
77
17
5
0
0.96
3951--3996
22
2.1
22
95
0
83
60
15
10
13
1.58
4943--5015
29
2.5
30
86
2
94
19
19
17
43
1.88
5140--5188
22
2.2
22
85
10
64
55
2
2
40
1.23
5140--5204
23
3.0
21
80
14
71
49
1
3
46
1.27
6235--6285
21
2.3
23
80
12
63
41
1
3
52
1.31
7316--7385
35
2.0
35
97
0
131
44
14
10
31
1.78
12717--12758
18
2.3
18
80
8
50
40
0
35
23
1.55

Tables:   1

The End!