Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021784.1 Corchorus olitorius cultivar O-4 contig21817, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4713

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
265--338
26
2.8
27
79
4
87
40
25
14
18
1.89
742--986
35
7.0
34
86
5
321
28
22
18
30
1.97
1168--1446
64
4.5
64
82
6
328
28
22
13
35
1.92
1170--1413
128
1.9
128
88
1
364
27
22
13
36
1.92
1439--1676
67
3.6
66
89
2
354
24
23
15
36
1.94

Tables:   1

The End!