Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021791.1 Corchorus olitorius cultivar O-4 contig21824, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13822

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2221--2334
57
2.0
57
100
0
228
43
10
22
22
1.84
2627--2663
19
1.9
19
94
0
65
62
0
5
32
1.18
2994--3048
17
3.2
17
80
17
60
7
16
3
72
1.21
5492--5560
2
34.5
2
74
25
58
49
7
0
43
1.30
5483--5557
12
6.3
12
84
15
70
49
6
1
42
1.37
6298--6543
129
1.9
130
87
3
363
37
10
2
50
1.48
10943--11010
26
2.6
26
100
0
136
51
10
4
33
1.56
11145--11191
22
2.1
22
84
7
60
61
2
12
23
1.42
11068--11252
93
2.0
93
91
2
300
51
2
13
32
1.53
11447--11477
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!