Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021792.1 Corchorus olitorius cultivar O-4 contig21825, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16781

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7640--7677
20
1.9
20
88
0
58
28
15
23
31
1.96
10748--10838
30
3.0
30
98
1
173
26
16
19
37
1.93
14021--14071
14
3.2
16
78
13
52
35
23
7
33
1.84
14980--15147
31
5.6
30
69
16
132
33
20
19
26
1.96
14984--15145
60
2.7
60
96
1
290
34
20
19
25
1.96
15015--15114
29
3.4
29
69
17
89
33
18
21
28
1.96
15183--15353
31
5.7
30
68
13
118
28
20
18
32
1.96
15220--15318
29
3.3
29
69
15
94
29
21
17
32
1.96
15187--15350
60
2.7
60
94
0
283
28
20
18
32
1.96

Tables:   1

The End!