Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021794.1 Corchorus olitorius cultivar O-4 contig21827, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28608

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
598--649
22
2.3
23
90
3
79
25
7
15
51
1.69
5701--5756
23
2.6
21
73
13
51
37
7
3
51
1.47
5707--5754
23
2.1
23
88
0
69
33
6
2
58
1.35
6820--6845
12
2.2
12
100
0
52
19
0
30
50
1.48
9990--10030
21
2.0
21
100
0
82
19
9
4
65
1.40
19494--19915
78
5.4
78
90
1
630
21
18
26
32
1.97
27474--27510
19
1.9
19
100
0
74
54
10
18
16
1.71

Tables:   1

The End!