Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021802.1 Corchorus olitorius cultivar O-4 contig21835, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15019

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
114--169
27
2.1
26
83
9
69
46
1
7
44
1.41
219--259
2
20.5
2
100
0
82
48
0
0
51
1.00
1817--1850
17
2.1
16
94
5
59
29
0
8
61
1.26
2077--2122
22
2.1
22
91
0
74
50
4
15
30
1.63
5522--5648
22
5.7
22
76
9
98
41
10
11
36
1.76
5673--5748
22
3.5
22
83
3
93
40
9
6
43
1.63
7951--8012
27
2.3
26
81
15
65
46
1
6
45
1.38
8640--8672
11
3.0
11
91
8
50
42
0
3
54
1.15
9335--9706
178
2.1
178
84
3
480
36
15
13
34
1.86

Tables:   1

The End!