Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021805.1 Corchorus olitorius cultivar O-4 contig21838, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25975

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71--96
3
8.7
3
100
0
52
0
30
0
69
0.89
890--938
25
2.0
25
84
8
64
40
0
0
59
0.98
890--939
22
2.3
21
81
18
59
42
0
0
58
0.98
4210--4241
15
2.1
15
94
0
55
46
15
12
25
1.81
5125--5384
129
2.0
129
82
9
316
38
11
2
47
1.52
6634--6674
20
2.0
20
100
0
82
43
4
9
41
1.59
10144--10168
1
25.0
1
100
0
50
0
0
0
100
0.00
16831--17016
90
2.1
90
87
2
266
19
26
14
39
1.90
19601--19666
10
6.3
10
73
22
55
42
1
1
54
1.18
19603--19666
16
4.6
14
71
17
53
42
1
1
54
1.19
19606--19670
31
2.1
32
82
8
80
43
1
1
53
1.19
19599--19679
22
3.5
25
73
17
77
44
1
1
53
1.16
20085--20208
61
2.0
61
100
0
248
31
20
27
20
1.98

Tables:   1

The End!