Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021817.1 Corchorus olitorius cultivar O-4 contig21850, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14947

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6576--6667
31
2.9
32
81
3
123
11
20
28
39
1.88
10166--10201
2
17.5
2
94
5
63
50
2
0
47
1.15
11637--11750
58
2.0
58
91
1
185
32
14
20
32
1.93
13017--13086
36
1.9
36
91
0
113
21
10
8
60
1.55
13603--14008
197
2.0
202
90
5
628
45
8
10
35
1.70
14117--14197
39
2.0
40
90
2
128
37
4
8
49
1.55

Tables:   1

The End!