Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021828.1 Corchorus olitorius cultivar O-4 contig21861, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45549

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1202--1491
144
2.0
147
91
3
469
40
10
9
40
1.71
1407--1624
109
2.0
109
94
0
382
44
14
10
31
1.78
3057--3091
17
2.1
17
94
0
61
40
2
8
48
1.49
7979--8007
15
1.9
15
100
0
58
17
0
34
48
1.47
8788--8849
32
1.9
32
93
0
106
45
25
6
22
1.76
13869--13904
16
2.2
16
100
0
72
19
16
25
38
1.92
38456--38708
111
2.3
110
88
4
357
28
22
19
28
1.98
38549--38868
160
2.0
160
99
0
631
27
25
20
26
1.99
38981--39110
49
2.7
47
84
8
163
50
6
14
29
1.67

Tables:   1

The End!