Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021862.1 Corchorus olitorius cultivar O-4 contig21895, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15727

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9289--9343
26
2.1
26
83
6
67
43
1
10
43
1.50
9257--9487
114
2.0
114
87
6
335
49
5
10
34
1.61
9596--9698
43
2.4
44
86
4
138
38
11
10
38
1.77
9596--9720
65
1.9
64
80
9
146
40
12
8
38
1.73
9596--9781
22
8.5
22
73
11
127
34
14
10
40
1.80
15696--15727
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!