Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021864.1 Corchorus olitorius cultivar O-4 contig21897, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11790

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6384--6422
18
2.2
18
85
0
51
35
2
20
41
1.66
6820--6856
15
2.4
15
90
4
56
72
0
13
13
1.11
6820--6872
8
6.5
8
77
12
54
73
0
11
15
1.09
6820--6865
17
2.8
16
87
9
58
73
0
13
13
1.09
9060--9485
163
2.6
163
86
1
582
29
19
16
33
1.95
9616--10329
30
23.8
30
84
4
897
20
13
16
49
1.80
10458--10507
25
1.9
25
84
8
64
32
16
14
38
1.88
10712--10745
9
3.7
9
84
7
50
85
0
0
14
0.60

Tables:   1

The End!