Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021875.1 Corchorus olitorius cultivar O-4 contig21908, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37798

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--34
2
17.0
2
100
0
68
50
0
0
50
1.00
1403--1445
1
43.0
1
80
0
50
0
6
2
90
0.52
1403--1445
16
2.7
16
92
0
68
0
6
2
90
0.52
3109--3153
23
1.9
24
81
4
56
33
8
20
37
1.83
16244--16294
26
2.0
26
81
7
61
41
23
7
27
1.82
16255--16307
26
2.0
26
92
0
88
35
20
13
30
1.91
17798--17920
65
1.9
65
91
0
201
35
17
18
28
1.93
18744--19273
42
12.8
41
83
11
458
38
15
15
30
1.89
18989--19281
79
3.5
88
79
13
237
35
15
16
33
1.90
21363--21415
19
2.8
19
76
0
52
39
16
16
26
1.91
22565--22634
35
2.0
35
100
0
140
42
20
8
28
1.81
24271--24330
29
2.1
29
93
0
102
20
21
45
13
1.85
26501--26595
46
2.1
46
97
0
181
22
29
17
30
1.97
32338--32388
25
2.1
25
88
3
77
31
7
29
31
1.86
32338--32396
24
2.4
25
83
8
68
33
6
27
32
1.83
32713--32769
16
3.4
16
69
21
53
50
7
3
38
1.46
33516--33854
175
1.9
175
90
1
536
28
19
18
33
1.95
36340--36457
60
2.0
59
89
1
182
34
13
19
32
1.91
37707--37777
37
1.9
37
91
2
117
21
8
8
61
1.50

Tables:   1

The End!