Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021886.1 Corchorus olitorius cultivar O-4 contig21919, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12705

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1907--1931
7
3.6
7
100
0
50
28
28
12
32
1.92
4519--4553
2
17.5
2
93
0
61
45
0
2
51
1.16
4980--5010
13
2.3
14
94
5
55
45
6
12
35
1.68
7610--8034
35
12.1
35
82
5
473
19
20
18
40
1.91
7610--8034
141
3.0
141
83
5
529
19
20
18
40
1.91
7610--8034
106
4.0
105
82
5
473
19
20
18
40
1.91
8543--8997
30
15.0
30
88
2
642
19
13
19
47
1.82
8543--8997
91
5.0
90
87
3
644
19
13
19
47
1.82
8543--8997
121
3.8
120
88
3
646
19
13
19
47
1.82
9495--9576
28
3.0
28
87
5
105
15
15
23
45
1.85

Tables:   1

The End!