Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021888.1 Corchorus olitorius cultivar O-4 contig21921, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22183

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--41
2
17.0
2
100
0
68
50
0
0
50
1.00
13427--13488
18
3.6
18
70
22
60
32
16
9
41
1.80
13827--13881
20
2.9
17
84
15
65
47
0
0
52
1.00
14774--14842
31
2.3
31
87
7
97
30
17
24
27
1.97
14857--14882
12
2.2
12
100
0
52
46
0
0
53
1.00
17255--17334
29
2.7
30
86
3
99
28
20
11
40
1.86
17458--17552
29
3.1
31
87
7
149
44
11
13
30
1.80
17458--17550
31
3.1
29
90
4
132
45
11
13
29
1.80
18157--18396
127
1.9
126
83
5
315
35
10
1
52
1.46
18486--18514
14
2.0
15
93
6
51
82
0
17
0
0.66
18762--18835
29
2.5
30
88
4
105
43
13
18
24
1.86

Tables:   1

The End!