Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021898.1 Corchorus olitorius cultivar O-4 contig21931, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17044

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1011--1161
76
2.0
76
80
7
173
17
29
29
24
1.97
8088--8136
18
2.7
19
78
15
59
18
6
18
57
1.61
8167--8211
15
2.9
15
83
6
54
53
13
0
33
1.40
8844--8881
2
19.0
2
100
0
76
50
0
0
50
1.00
9002--9030
3
9.7
3
100
0
58
34
0
31
34
1.58
10069--10097
2
14.5
2
100
0
58
48
0
0
51
1.00
12247--12283
19
1.9
19
100
0
74
48
8
16
27
1.74
13302--13346
12
3.5
13
81
9
56
57
11
0
31
1.33

Tables:   1

The End!