Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021900.1 Corchorus olitorius cultivar O-4 contig21933, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12873

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3794--3864
31
2.3
32
79
15
80
42
19
11
26
1.85
7991--8080
21
4.3
21
76
12
87
37
2
26
33
1.69
8011--8042
15
2.1
15
100
0
64
34
0
25
40
1.56
8038--8080
18
2.4
18
92
7
70
39
4
27
27
1.76
7991--8044
3
18.0
3
83
7
56
37
0
25
37
1.57
8089--8129
18
2.3
18
86
0
55
70
2
21
4
1.18

Tables:   1

The End!