Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021904.1 Corchorus olitorius cultivar O-4 contig21937, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11444

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
717--968
132
1.9
132
100
0
504
30
9
14
44
1.78
1120--1170
26
2.0
26
88
11
79
37
11
11
39
1.79
7638--8047
201
2.0
204
94
2
729
36
11
8
43
1.70
8176--8337
60
2.7
59
90
4
247
35
19
20
24
1.95
8172--8337
31
5.6
29
69
15
106
34
19
20
24
1.96
8380--8544
31
5.5
30
70
16
135
26
20
19
33
1.96
8380--8540
60
2.7
60
96
0
286
26
19
19
34
1.96
8411--8509
29
3.4
28
72
15
92
27
20
19
33
1.96
8944--9013
36
1.9
36
88
0
104
61
8
8
21
1.52
10276--10385
58
1.9
58
87
7
161
33
19
13
33
1.91

Tables:   1

The End!