Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021909.1 Corchorus olitorius cultivar O-4 contig21942, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14717

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1746--1792
13
3.6
13
81
18
53
31
0
8
59
1.27
5598--5726
53
2.5
53
98
1
251
38
15
19
26
1.91
5908--5968
32
1.9
31
83
3
77
26
26
19
27
1.99
11859--11898
17
2.2
20
86
13
59
27
12
2
57
1.48
13889--13938
24
2.1
24
88
0
73
46
20
10
24
1.81
14264--14294
15
2.1
15
100
0
62
41
6
12
38
1.69
14267--14299
8
4.2
8
84
7
50
39
3
12
45
1.57

Tables:   1

The End!