Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021910.1 Corchorus olitorius cultivar O-4 contig21943, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15638

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62--86
13
1.9
13
100
0
50
16
4
8
72
1.24
220--251
16
2.0
16
100
0
64
43
6
18
31
1.75
2015--2049
18
1.9
18
100
0
70
45
5
17
31
1.71
4863--4947
37
2.3
37
93
0
143
35
4
7
52
1.49
7023--7110
41
2.1
41
91
0
140
30
12
15
40
1.85
14494--14638
76
1.9
76
80
8
170
17
29
28
24
1.97

Tables:   1

The End!