Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021920.1 Corchorus olitorius cultivar O-4 contig21953, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20003

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5587--5691
53
2.0
53
92
0
174
48
14
6
30
1.69
11905--11939
17
2.0
18
88
5
54
48
0
5
45
1.26
14936--15187
132
1.9
130
90
3
398
37
11
1
49
1.49
15986--16014
13
2.1
14
93
6
51
37
3
0
58
1.15
16757--17254
123
3.9
126
78
16
494
39
10
3
45
1.57
16921--17254
142
2.5
130
77
15
373
38
10
3
47
1.56
18895--18961
6
11.3
6
79
7
66
77
0
22
0
0.77
18895--18957
12
5.2
12
80
14
76
76
0
23
0
0.79
18895--18961
18
3.8
17
86
11
91
77
0
22
0
0.77

Tables:   1

The End!