Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021925.1 Corchorus olitorius cultivar O-4 contig21958, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18379

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4590--4617
2
14.0
2
100
0
56
50
0
0
50
1.00
12198--12245
22
2.2
22
85
3
62
16
18
10
54
1.70
13396--13447
22
2.4
22
80
6
61
25
11
11
51
1.71
15555--15592
18
2.2
17
95
4
67
44
0
23
31
1.54
15559--15592
9
3.9
9
92
3
52
47
0
26
26
1.53
16844--16972
49
2.7
49
85
7
183
24
14
4
55
1.58
17803--17836
15
2.3
15
89
0
50
41
11
26
20
1.87

Tables:   1

The End!