Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021928.1 Corchorus olitorius cultivar O-4 contig21961, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21271

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3080--3120
7
5.9
7
91
8
66
46
12
0
41
1.41
3081--3126
14
3.1
15
90
6
58
47
13
0
39
1.42
4040--4259
110
2.0
111
89
0
334
43
23
14
19
1.87
4291--4637
178
2.0
174
88
5
511
22
19
17
39
1.92
5196--5238
19
2.3
19
87
0
59
20
13
13
51
1.76
10239--10272
17
2.1
17
88
5
52
58
8
14
17
1.61
11649--11717
33
2.1
33
94
0
120
49
4
30
15
1.64
12098--12363
128
2.1
127
92
2
435
46
7
10
35
1.66
13855--13892
11
3.5
11
89
10
51
39
0
2
57
1.12
19275--19316
21
2.0
22
95
4
77
38
4
16
40
1.70
20641--20675
18
1.9
18
94
0
61
51
11
8
28
1.67
20692--20729
18
2.1
18
100
0
76
65
18
10
5
1.41
20692--20738
18
2.6
18
90
6
60
68
17
10
4
1.35

Tables:   1

The End!