Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021948.1 Corchorus olitorius cultivar O-4 contig21981, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10218

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3837--3887
24
2.1
25
88
3
77
17
5
3
72
1.20
5489--5585
45
2.2
45
94
0
167
29
35
19
15
1.93
8522--8575
24
2.2
25
93
3
92
20
3
3
72
1.16
8521--8566
12
3.7
13
72
21
53
19
4
4
71
1.20
9143--9176
15
2.3
15
94
0
59
70
0
29
0
0.87
9493--9550
27
2.1
27
93
0
98
22
24
22
31
1.99

Tables:   1

The End!