Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021952.1 Corchorus olitorius cultivar O-4 contig21985, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19982

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98--134
18
2.1
18
89
0
56
45
10
0
43
1.39
464--520
28
2.0
29
96
3
107
31
14
10
43
1.79
8040--8074
16
2.2
16
100
0
70
48
22
5
22
1.72
9894--9942
25
2.0
25
100
0
98
14
32
20
32
1.92
11823--11935
48
2.3
48
83
10
133
21
14
23
41
1.89
11816--11909
16
5.9
16
74
9
75
20
14
23
41
1.89
11816--11911
32
3.0
32
79
8
115
20
14
23
40
1.90
14523--14593
29
2.4
31
79
18
87
29
28
9
32
1.89
14845--14965
31
3.9
32
74
15
94
33
9
23
33
1.86
14892--14964
29
2.4
31
84
6
96
32
8
24
34
1.85
17392--17438
20
2.4
20
85
3
60
40
6
17
36
1.75
18200--18266
30
2.3
29
82
7
82
38
20
10
29
1.86
18526--18591
30
2.2
30
78
7
73
25
10
21
42
1.85

Tables:   1

The End!