Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021953.1 Corchorus olitorius cultivar O-4 contig21986, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25958

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9607--9643
18
2.1
18
100
0
74
32
40
5
21
1.76
10303--10354
26
2.0
26
100
0
104
30
23
11
34
1.90
11815--12617
22
37.0
22
67
16
234
34
16
9
38
1.82
11844--12001
82
1.9
84
82
2
203
32
17
8
41
1.79
12643--12850
22
9.4
21
71
10
101
36
18
9
35
1.84
12635--12852
66
3.3
66
80
5
215
36
18
10
34
1.84
14420--14476
21
2.6
22
88
5
80
50
10
7
31
1.63
14421--14479
22
2.6
23
78
13
68
50
8
6
33
1.59
18965--19186
87
2.6
86
78
9
227
35
23
8
32
1.85
23491--23599
38
2.9
38
75
10
116
21
17
29
32
1.96

Tables:   1

The End!