Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021956.1 Corchorus olitorius cultivar O-4 contig21989, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31133

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3688--3755
29
2.3
29
92
0
118
25
16
4
54
1.60
4284--4318
14
2.6
14
91
8
56
40
8
28
22
1.84
8731--8937
107
1.9
108
93
2
353
27
20
16
35
1.94
11328--11492
22
7.5
22
74
6
129
38
9
15
36
1.80
11327--11390
21
3.0
22
78
15
71
45
9
18
26
1.80
14574--14630
30
1.9
30
85
7
80
52
17
3
26
1.60
16020--16051
2
16.0
2
100
0
64
50
0
0
50
1.00
17410--17655
41
5.8
41
83
8
291
43
25
10
20
1.84
17410--17655
84
2.9
84
92
1
404
43
25
10
20
1.84
17789--17826
2
19.0
2
100
0
76
0
0
50
50
1.00

Tables:   1

The End!