Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021959.1 Corchorus olitorius cultivar O-4 contig21992, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37070

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
655--852
104
1.9
104
87
4
292
51
3
12
33
1.55
1141--1165
6
4.2
6
100
0
50
68
0
0
32
0.90
4466--4516
23
2.1
23
85
10
66
0
5
15
78
0.93
6449--6502
14
4.0
14
73
22
53
5
31
12
50
1.64
6440--6490
26
2.0
25
96
3
93
3
29
15
50
1.62
10369--10405
14
2.4
16
86
8
51
8
18
0
72
1.08
20895--20952
19
2.9
19
80
9
71
37
12
18
31
1.88
27883--27916
14
2.4
14
95
0
59
23
8
0
67
1.18
27944--27974
15
2.1
15
100
0
62
19
6
12
61
1.53
29331--29398
34
2.0
34
97
0
127
33
11
10
44
1.75
32397--32424
14
2.0
14
100
0
56
64
0
0
35
0.94
32961--33068
31
3.5
31
81
5
146
18
25
25
30
1.98
33782--33841
17
3.6
16
75
18
59
25
15
25
35
1.94
34114--34185
36
2.0
36
91
0
117
37
19
11
31
1.87
34798--34829
15
2.1
15
100
0
64
34
18
34
12
1.89

Tables:   1

The End!