Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021972.1 Corchorus olitorius cultivar O-4 contig22005, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18052

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4283--4313
16
1.9
16
93
0
53
22
3
16
58
1.52
6352--6462
30
3.7
30
83
6
136
36
34
5
24
1.78
6351--6463
60
1.9
60
87
7
167
36
34
5
23
1.78
7148--7205
31
1.9
29
86
6
80
44
13
20
20
1.85
12629--12704
29
2.6
28
80
14
82
23
10
15
50
1.75
17528--17560
6
5.5
6
96
0
57
27
0
33
39
1.57

Tables:   1

The End!