Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021977.1 Corchorus olitorius cultivar O-4 contig22010, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5588

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
262--381
23
5.6
22
74
15
117
25
45
15
14
1.83
285--358
19
3.7
19
76
13
85
22
45
14
16
1.84
258--383
42
3.0
42
95
0
225
24
45
15
14
1.84
1081--1113
14
2.4
14
94
0
57
57
12
9
21
1.62
5551--5588
2
19.0
2
100
0
76
50
0
50
0
1.00

Tables:   1

The End!